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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: FAM71D ENSG00000172717

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Description

family with sequence similarity 71, member D [Source:HGNC Symbol;Acc:20101]

Gene Synonyms

C14orf54

Location

Chromosome 14: 67,656,110-67,695,267 forward strand.

GRCh37:CM000676.1

About this gene

This gene has 10 transcripts (splice variants), 114 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000530728.1	FAM71D-004	552	77aa	ENSP00000433183.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PM27 E9PPX0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000524532.1	FAM71D-005	543	65aa	ENSP00000436280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PPX0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000556117.1	FAM71D-007	359	52aa	ENSP00000451960.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000557671.1	FAM71D-008	350	71aa	ENSP00000450695.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000311864.3	FAM71D-001	1754	422aa	ENSP00000431905.1	Nonsense mediated decay	CCDS9778	E9PM27 E9PPX0 Q8N9W8	NM_173526.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENST00000556046.1	FAM71D-009	2136	86aa	ENSP00000451865.1	Nonsense mediated decay		G3V4K8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000534174.1	FAM71D-003	1651	400aa	ENSP00000432195.1	Nonsense mediated decay		E9PM27 E9PPX0 Q8N9W8	-	-
ENST00000524914.1	FAM71D-012	1589	56aa	ENSP00000454526.1	Nonsense mediated decay		H3BMS9	-	-
ENST00000554500.1	FAM71D-010	421	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531566.1	FAM71D-006	374	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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