Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: CTSW ENSG00000172543

.

Description

cathepsin W [Source:HGNC Symbol;Acc:2546]

Gene Synonyms

LYPN

Location

Chromosome 11: 65,647,280-65,651,212 forward strand.

GRCh37:CM000673.1

About this gene

This gene has 4 transcripts (splice variants), 445 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000307886.3	CTSW-001	1300	376aa	ENSP00000311300.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8117	P56202	NM_001335.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000528419.1	CTSW-002	1341	364aa	ENSP00000436568.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PI30	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000526034.1	CTSW-004	634	211aa	ENSP00000434267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YDT2	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000524681.1	CTSW-003	521	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

.

Summary

.

.