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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PAIP1 ENSG00000172239

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Description

poly(A) binding protein interacting protein 1 [Source:HGNC Symbol;Acc:16945]

Location

Chromosome 5: 43,526,369-43,557,860 reverse strand.

GRCh37:CM000667.1

About this gene

This gene has 10 transcripts (splice variants), 217 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000306846.3	PAIP1-001	2782	479aa	ENSP00000302768.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3947	D6RD97 D6RJ02 D6RJF2 Q9H074	NM_182789.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000338972.4	PAIP1-002	1814	367aa	ENSP00000339622.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3948	D6RD97 D6RJ02 D6RJF2 Q9H074	NM_183323.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000436644.2	PAIP1-003	1734	400aa	ENSP00000387729.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47204	D6RD97 D6RJ02 D6RJF2 Q9H074	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000514514.1	PAIP1-004	1603	351aa	ENSP00000425084.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RD97 D6REB4 D6RJ02 D6RJF2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000508537.1	PAIP1-008	752	168aa	ENSP00000425736.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RD97 D6RJ02	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000515338.1	PAIP1-010	726	95aa	ENSP00000425406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RD97	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000511321.1	PAIP1-006	706	200aa	ENSP00000425675.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RD97 D6RJ02 D6RJF2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000514816.1	PAIP1-007	515	49aa	ENSP00000426089.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YA44	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000504075.1	PAIP1-009	501	9aa	ENSP00000427410.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000504639.1	PAIP1-005	1766	266aa	ENSP00000422084.1	Nonsense mediated decay		D6R9H8 D6RD97	-	-

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Summary

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