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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ZNF554 ENSG00000172006

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Description

zinc finger protein 554 [Source:HGNC Symbol;Acc:26629]

Gene Synonyms

FLJ34817

Location

Chromosome 19: 2,819,872-2,835,771 forward strand.

GRCh37:CM000681.1

About this gene

This gene has 4 transcripts (splice variants), 140 orthologues and 62 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000317243.5	ZNF554-001	2736	538aa	ENSP00000321132.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42462	Q86TJ5	NM_001102651.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000591265.1	ZNF554-004	1148	181aa	ENSP00000467997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EQV8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000590116.1	ZNF554-002	2486	68aa	ENSP00000464865.1	Nonsense mediated decay		K7EIR8	-	-
ENST00000588534.1	ZNF554-005	4029	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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