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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SYNPO ENSG00000171992

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Description

synaptopodin [Source:HGNC Symbol;Acc:30672]

Gene Synonyms

KIAA1029

Location

Chromosome 5: 149,980,642-150,038,782 forward strand.

GRCh37:CM000667.1

About this gene

This gene has 5 transcripts (splice variants), 184 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394243.1	SYNPO-002	7063	929aa	ENSP00000377789.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54937	Q71HJ6 Q8N3V7	NM_001166208.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000307662.4	SYNPO-001	5374	903aa	ENSP00000302139.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4308	A7MD96 Q71HJ6 Q8N3V7	NM_007286.5	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000522122.1	SYNPO-003	5098	929aa	ENSP00000428378.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54937	Q71HJ6 Q8N3V7	NM_001166209.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000519664.1	SYNPO-004	4571	685aa	ENSP00000429268.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54938	Q71HJ6 Q8N3V7	NM_001109974.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000518872.1	SYNPO-005	548	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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