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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CXXC5 ENSG00000171604

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Description

CXXC finger protein 5 [Source:HGNC Symbol;Acc:26943]

Gene Synonyms

CF5, HSPC195, RINF, WID

Location

Chromosome 5: 139,026,884-139,063,467 forward strand.

GRCh37:CM000667.1

About this gene

This gene has 16 transcripts (splice variants), 199 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000302517.3	CXXC5-001	2658	322aa	ENSP00000302543.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43370	D6R966 D6R9V1 D6RBE0 D6RCN9 D6RDY2 D6RHC6 D6RHG9 D6RIR8 E7EV55 E7EVI8 Q7LFL8	NM_016463.7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000511048.1	CXXC5-002	1892	322aa	ENSP00000427379.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43370	D6R966 D6R9V1 D6RBE0 D6RCN9 D6RDY2 D6RHC6 D6RHG9 D6RIR8 E7EV55 E7EVI8 Q7LFL8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000502716.1	CXXC5-014	900	181aa	ENSP00000424219.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R966 D6R9V1 D6RBE0 D6RCN9 D6RDY2 D6RHC6 D6RHG9 D6RIR8 E7EV55	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520967.1	CXXC5-018	878	137aa	ENSP00000430522.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R966 D6R9V1 D6RCN9 D6RHC6 D6RHG9 D6RIR8 E7EV55	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000511457.1	CXXC5-017	810	196aa	ENSP00000430949.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R966 D6R9V1 D6RBE0 D6RCN9 D6RDY2 D6RHC6 D6RHG9 D6RIR8 E7EV55 E7EVI8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000504844.1	CXXC5-010	777	161aa	ENSP00000425203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R966 D6R9V1 D6RCN9 D6RDY2 D6RHC6 D6RHG9 D6RIR8 E7EV55	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000502336.1	CXXC5-011	581	80aa	ENSP00000426124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R966 D6RCN9 D6RHG9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000504944.1	CXXC5-006	568	102aa	ENSP00000422883.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R966 D6R9V1 D6RCN9 D6RHC6 D6RHG9 D6RIR8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000512816.1	CXXC5-007	558	73aa	ENSP00000423365.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R966 D6RCN9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000509238.1	CXXC5-008	542	98aa	ENSP00000427440.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R966 D6RCN9 D6RHC6 D6RHG9 D6RIR8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000503511.1	CXXC5-016	506	83aa	ENSP00000421057.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R966 D6RCN9 D6RHC6 D6RHG9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000502295.1	CXXC5-005	503	68aa	ENSP00000427127.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RCN9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000507139.1	CXXC5-009	472	11aa	ENSP00000427253.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000511591.1	CXXC5-013	442	8aa	ENSP00000421866.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000515038.1	CXXC5-015	760	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505812.1	CXXC5-012	353	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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