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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: COL24A1 ENSG00000171502

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Description

collagen, type XXIV, alpha 1 [Source:HGNC Symbol;Acc:20821]

Location

Chromosome 1: 86,194,916-86,622,626 reverse strand.

GRCh37:CM000663.1

About this gene

This gene has 6 transcripts (splice variants), 91 orthologues and 37 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370571.2	COL24A1-001	6825	1714aa	ENSP00000359603.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41353	E9PNK8 Q17RW2	NM_152890.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000436319.1	COL24A1-201	6437	1693aa	ENSP00000392531.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PNK8 Q17RW2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000496682.2	COL24A1-003	366	81aa	ENSP00000434740.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PNK8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000426639.1	COL24A1-004	6036	890aa	ENSP00000409515.1	Nonsense mediated decay		E9PNK8 F8WDM8	-	-
ENST00000473734.1	COL24A1-005	784	166aa	ENSP00000432605.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000485434.1	COL24A1-002	2376	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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