Description
ribosomal L1 domain containing 1 [Source:HGNC Symbol;Acc:24534]
Gene Synonyms
CATX11, CSIG, DKFZP564M182, L12, PBK1, UTP30
Location
Chromosome 16: 11,929,056-11,945,442 reverse strand.
GRCh37:CM000678.1
About this gene
This gene has 13 transcripts (splice variants), 213 orthologues and 3 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000571133.1 | RSL1D1-001 | 4134 | 490aa | ENSP00000460871.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10551 | B4DJ58 I3L234 O76021 | NM_015659.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000542106.1 | RSL1D1-201 | 1470 | 270aa | ENSP00000442089.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DJ58 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000355674.5 | RSL1D1-002 | 1323 | 430aa | ENSP00000347897.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0PJ61 I3L234 J3QSV6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000573251.1 | RSL1D1-011 | 894 | 296aa | ENSP00000460748.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L234 I3L3U9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000573791.1 | RSL1D1-008 | 520 | 98aa | ENSP00000459331.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L234 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000571988.1 | RSL1D1-009 | 509 | 158aa | ENSP00000460343.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L234 I3L3C4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000396503.3 | RSL1D1-003 | 1470 | 39aa | ENSP00000379760.3 | Nonsense mediated decay | J3KPU7 | - | - | |
| ENST00000570767.1 | RSL1D1-007 | 871 | 43aa | ENSP00000459622.1 | Nonsense mediated decay | I3L2F2 | - | - | |
| ENST00000573029.1 | RSL1D1-005 | 766 | 46aa | ENSP00000461513.1 | Nonsense mediated decay | I3L4T8 | - | - | |
| ENST00000572090.1 | RSL1D1-004 | 759 | 93aa | ENSP00000458684.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000573618.1 | RSL1D1-006 | 710 | 47aa | ENSP00000459207.1 | Nonsense mediated decay | I3L1Y4 | - | - | |
| ENST00000574823.1 | RSL1D1-012 | 576 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000574287.1 | RSL1D1-010 | 485 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
