Description
SUMO-interacting motifs containing 1 [Source:HGNC Symbol;Acc:24779]
Gene Synonyms
C5orf25, FLJ44216, OOMA1, PLEIAD
Location
Chromosome 5: 175,665,365-175,772,994 forward strand.
GRCh37:CM000667.1
About this gene
This gene has 11 transcripts (splice variants), 182 orthologues and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000341199.6 | SIMC1-201 | 2061 | 457aa | ENSP00000342075.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4398 | Q8NDZ2 | NM_198567.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000443967.1 | SIMC1-001 | 3572 | 872aa | ENSP00000406571.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8NDZ2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000429602.2 | SIMC1-202 | 2004 | 611aa | ENSP00000410552.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DRM7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000430704.2 | SIMC1-002 | 1925 | 457aa | ENSP00000409287.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4398 | Q8NDZ2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000332772.4 | SIMC1-003 | 1891 | 333aa | ENSP00000331311.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8NDZ2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000503595.1 | SIMC1-009 | 847 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000514128.1 | SIMC1-008 | 697 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000508769.1 | SIMC1-010 | 461 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000467472.1 | SIMC1-007 | 364 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000495423.1 | SIMC1-006 | 913 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000481515.1 | SIMC1-004 | 896 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
