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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TRAPPC1 ENSG00000170043

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Description

trafficking protein particle complex 1 [Source:HGNC Symbol;Acc:19894]

Gene Synonyms

BET5, MUM2

Location

Chromosome 17: 7,833,663-7,835,441 reverse strand.

GRCh37:CM000679.1

About this gene

This gene has 7 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000303731.4	TRAPPC1-001	811	145aa	ENSP00000302783.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11125	I3L3S0 I3L3V5 Q9Y5R8	NM_021210.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540486.1	TRAPPC1-201	759	145aa	ENSP00000441130.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11125	I3L3S0 I3L3V5 Q9Y5R8	NM_001166621.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000572656.1	TRAPPC1-002	409	75aa	ENSP00000460761.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L3V5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000571947.1	TRAPPC1-006	306	95aa	ENSP00000460674.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L3S0 I3L3V5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000571739.1	TRAPPC1-003	648	42aa	ENSP00000459045.1	Nonsense mediated decay		I3L1R8	-	-
ENST00000575639.1	TRAPPC1-004	561	42aa	ENSP00000460702.1	Nonsense mediated decay		I3L1R8	-	-
ENST00000573989.1	TRAPPC1-005	436	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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