Description
centrobin, centrosomal BRCA2 interacting protein [Source:HGNC Symbol;Acc:29616]
Gene Synonyms
LIP8, PP1221
Location
Chromosome 17: 7,835,419-7,853,236 forward strand.
GRCh37:CM000679.1
About this gene
This gene has 16 transcripts (splice variants) and 124 orthologues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000380262.3 | CNTROB-001 | 3769 | 925aa | ENSP00000369614.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32557 | I3L1B0 I3L1Z8 I3L465 Q8N137 | NM_001037144.5 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000563694.1 | CNTROB-002 | 3705 | 903aa | ENSP00000456335.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11126 | I3L1B0 I3L1Z8 I3L465 Q8N137 | NM_053051.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000380255.3 | CNTROB-201 | 3477 | 554aa | ENSP00000369605.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L1B0 I3L1Z8 I3L465 Q8N137 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000565740.1 | CNTROB-003 | 2783 | 904aa | ENSP00000454840.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L1B0 I3L1Z8 I3L465 Q8N137 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000575408.1 | CNTROB-010 | 917 | 199aa | ENSP00000458696.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L1B0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000576538.1 | CNTROB-007 | 784 | 198aa | ENSP00000459246.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L1Z8 I3L465 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000570782.1 | CNTROB-008 | 752 | 13aa | ENSP00000460583.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000570784.1 | CNTROB-009 | 695 | 77aa | ENSP00000461000.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L465 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000576536.1 | CNTROB-016 | 561 | 187aa | ENSP00000458251.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L0P9 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000571632.1 | CNTROB-004 | 2960 | 26aa | ENSP00000458787.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000571540.1 | CNTROB-011 | 1209 | 242aa | ENSP00000458688.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000576723.1 | CNTROB-006 | 2461 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000576922.1 | CNTROB-005 | 1468 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000576587.1 | CNTROB-012 | 903 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000573862.1 | CNTROB-015 | 808 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000574430.1 | CNTROB-014 | 652 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
