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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TRIM56 ENSG00000169871

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Description

tripartite motif containing 56 [Source:HGNC Symbol;Acc:19028]

Gene Synonyms

RNF109

Location

Chromosome 7: 100,728,720-100,735,017 forward strand.

GRCh37:CM000669.1

About this gene

This gene has 4 transcripts (splice variants), 118 orthologues and 80 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000306085.6	TRIM56-001	3613	755aa	ENSP00000305161.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43625	Q9BRZ2	NM_030961.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000412507.1	TRIM56-002	1129	305aa	ENSP00000404186.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JI91	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000487252.1	TRIM56-004	735	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467847.1	TRIM56-003	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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