Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: SPNS1 ENSG00000169682

.

Description

spinster homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:30621]

Gene Synonyms

HSpin1, LAT, PP2030, SPIN1, SPINL, nrs

Location

Chromosome 16: 28,985,542-28,995,869 forward strand.

GRCh37:CM000678.1

About this gene

This gene has 12 transcripts (splice variants), 191 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000311008.11	SPNS1-001	2208	528aa	ENSP00000309945.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10646	H3BP14 H3BT44 Q9H2V7	NM_032038.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000323081.8	SPNS1-002	2102	455aa	ENSP00000318228.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45454	H3BP14 Q9H2V7	NM_001142450.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000334536.8	SPNS1-006	2027	476aa	ENSP00000335494.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45452	H3BP14 H3BT44 Q9H2V7	NM_001142451.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000565975.1	SPNS1-003	1979	573aa	ENSP00000454360.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BMF4 H3BP14 H3BT44	NM_001142448.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000352260.7	SPNS1-005	1948	454aa	ENSP00000306050.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45453	Q9H2V7	NM_001142449.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000566059.1	SPNS1-007	1615	538aa	ENSP00000456119.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP14 H3BR82	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000564476.1	SPNS1-012	890	274aa	ENSP00000455429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP14	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000567771.1	SPNS1-008	829	178aa	ENSP00000457011.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BT44	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000568829.1	SPNS1-011	780	179aa	ENSP00000455467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000568388.1	SPNS1-009	759	142aa	ENSP00000455101.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP14	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000561868.1	SPNS1-010	441	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000568900.1	SPNS1-004	2253	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

.

Summary

.

.