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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PTPN9 ENSG00000169410

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Description

protein tyrosine phosphatase, non-receptor type 9 [Source:HGNC Symbol;Acc:9661]

Gene Synonyms

MEG2, PTPMEG2

Location

Chromosome 15: 75,759,462-75,871,630 reverse strand.

GRCh37:CM000677.1

About this gene

This gene has 5 transcripts (splice variants), 202 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000306726.2	PTPN9-001	3943	593aa	ENSP00000303554.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10280	P43378	NM_002833.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000561731.1	PTPN9-004	545	174aa	ENSP00000455934.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQT6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000564970.1	PTPN9-005	726	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000563835.1	PTPN9-002	338	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000568108.1	PTPN9-003	561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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