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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: STX18 ENSG00000168818

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Description

syntaxin 18 [Source:HGNC Symbol;Acc:15942]

Gene Synonyms

Ufe1

Location

Chromosome 4: 4,417,469-4,544,073 reverse strand.

GRCh37:CM000666.1

About this gene

This gene has 10 transcripts (splice variants) and 202 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000306200.2	STX18-001	2138	335aa	ENSP00000305810.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3377	D6RC71 D6RD65 Q9P2W9	NM_016930.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000505286.1	STX18-002	1380	308aa	ENSP00000426648.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RC71 D6RD65 D6RF48	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000507908.1	STX18-004	771	169aa	ENSP00000422376.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RC71	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000512195.1	STX18-007	577	173aa	ENSP00000425483.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RC71 D6RD65	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000503861.1	STX18-006	840	175aa	ENSP00000427543.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000503692.1	STX18-003	3497	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515687.1	STX18-009	1183	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000510296.1	STX18-010	895	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000512780.1	STX18-005	800	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000502267.1	STX18-008	672	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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