Description
tetraspanin 5 [Source:HGNC Symbol;Acc:17753]
Gene Synonyms
NET-4, NET4, TM4SF9, TSPAN-5, Tspan-5
Location
Chromosome 4: 99,391,518-99,579,780 reverse strand.
GRCh37:CM000666.1
About this gene
This gene has 10 transcripts (splice variants), 167 orthologues and 32 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000305798.3 | TSPAN5-001 | 3365 | 268aa | ENSP00000307701.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3646 | B7Z317 D6R9N6 D6RGZ7 P62079 | NM_005723.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000505184.1 | TSPAN5-004 | 1191 | 197aa | ENSP00000423916.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z317 D6R9N6 D6RGZ7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000511651.1 | TSPAN5-005 | 710 | 60aa | ENSP00000426248.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RGZ7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000515287.1 | TSPAN5-006 | 574 | 110aa | ENSP00000423504.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6R9N6 D6RGZ7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000508798.1 | TSPAN5-002 | 3242 | 193aa | ENSP00000421808.1 | Nonsense mediated decay | D6RAR1 D6RGZ7 | - | - | |
| ENST00000515440.1 | TSPAN5-009 | 605 | 87aa | ENSP00000422351.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000511800.1 | TSPAN5-008 | 581 | 38aa | ENSP00000422548.1 | Nonsense mediated decay | D6RBT5 | - | - | |
| ENST00000509168.1 | TSPAN5-007 | 539 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000511753.1 | TSPAN5-003 | 4062 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000507167.1 | TSPAN5-010 | 540 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
