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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PCMTD1 ENSG00000168300

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Description

protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 [Source:HGNC Symbol;Acc:30483]

Gene Synonyms

FLJ10883

Location

Chromosome 8: 52,730,140-52,811,735 reverse strand.

GRCh37:CM000670.1

About this gene

This gene has 8 transcripts (splice variants), 135 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000360540.5	PCMTD1-002	4252	357aa	ENSP00000353739.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6148	Q96MG8	NM_052937.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000544451.1	PCMTD1-201	3681	281aa	ENSP00000444026.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS69480	F5H1M8	NM_001286783.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000521344.1	PCMTD1-004	1712	105aa	ENSP00000430168.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGG7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000522514.1	PCMTD1-001	1287	357aa	ENSP00000428099.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6148	Q96MG8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000519554.1	PCMTD1-007	814	130aa	ENSP00000430340.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000519559.1	PCMTD1-003	1204	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519975.1	PCMTD1-006	995	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000521046.1	PCMTD1-005	856	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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