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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CCDC88B ENSG00000168071

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Description

coiled-coil domain containing 88B [Source:HGNC Symbol;Acc:26757]

Gene Synonyms

BRLZ, CCDC88, FLJ00354, FLJ37970, GIPIE, HKRP3, HkRP3, gipie

Location

Chromosome 11: 64,107,695-64,125,006 forward strand.

GRCh37:CM000673.1

About this gene

This gene has 10 transcripts (splice variants), 179 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356786.5	CCDC88B-001	4915	1476aa	ENSP00000349238.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8072	A6NC98	NM_032251.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000301897.4	CCDC88B-201	3024	139aa	ENSP00000301897.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NC98	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000359902.2	CCDC88B-005	2326	712aa	ENSP00000352974.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BY33	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000463837.1	CCDC88B-003	5235	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494080.1	CCDC88B-008	4563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479965.1	CCDC88B-007	3102	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494566.1	CCDC88B-004	2909	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492980.1	CCDC88B-002	2118	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473405.1	CCDC88B-009	783	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472524.1	CCDC88B-010	779	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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