Description
latent transforming growth factor beta binding protein 3 [Source:HGNC Symbol;Acc:6716]
Gene Synonyms
LTBP-3, LTBP2, STHAG6, pp6425
Location
Chromosome 11: 65,306,276-65,326,401 reverse strand.
GRCh37:CM000673.1
About this gene
This gene has 22 transcripts (splice variants), 185 orthologues, 3 paralogues and is associated with 7 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000301873.5 | LTBP3-001 | 4443 | 1303aa | ENSP00000301873.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44647 | E9PKW1 E9PR84 Q9NS15 Q9P0Z7 | NM_001130144.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000322147.4 | LTBP3-002 | 4046 | 1256aa | ENSP00000326647.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8103 | B9EG76 E9PPT7 E9PQR0 E9PR75 Q9NS15 | NM_021070.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000530866.1 | LTBP3-004 | 3756 | 1136aa | ENSP00000435276.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PKW1 Q9P0Z7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000532932.1 | LTBP3-007 | 3327 | 733aa | ENSP00000435530.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PJR2 E9PR84 Q9P0Z7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000526927.1 | LTBP3-006 | 2750 | 907aa | ENSP00000431219.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PPT7 E9PQR0 E9PR75 F5GWC4 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000536982.1 | LTBP3-201 | 2750 | 882aa | ENSP00000441912.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PPT7 E9PQR0 E9PR75 F5GWC4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000530785.1 | LTBP3-010 | 2461 | 306aa | ENSP00000434315.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PR84 Q9P0Z7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000529189.1 | LTBP3-009 | 1997 | 259aa | ENSP00000434406.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PPT7 E9PQR0 E9PR75 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000532661.1 | LTBP3-017 | 748 | 221aa | ENSP00000436341.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PPT7 E9PR75 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000527339.1 | LTBP3-019 | 619 | 140aa | ENSP00000432121.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YCQ2 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000529371.1 | LTBP3-016 | 575 | 123aa | ENSP00000436032.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PR75 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000530426.1 | LTBP3-014 | 431 | 143aa | ENSP00000432476.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YCX6 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000528516.1 | LTBP3-003 | 3935 | 116aa | ENSP00000432350.1 | Nonsense mediated decay | E9PRF2 | - | - | |
| ENST00000526825.1 | LTBP3-005 | 1002 | 69aa | ENSP00000435146.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000525443.1 | LTBP3-008 | 3162 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000529582.1 | LTBP3-011 | 1889 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000527792.1 | LTBP3-022 | 923 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000524798.1 | LTBP3-013 | 849 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000528966.1 | LTBP3-020 | 553 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000530990.1 | LTBP3-015 | 531 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000529764.1 | LTBP3-021 | 528 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000526124.1 | LTBP3-018 | 347 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
