Description
autophagy related 16-like 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:25464]
Gene Synonyms
ATG16B, FLJ00012, WDR80
Location
Chromosome 11: 72,525,353-72,554,719 forward strand.
GRCh37:CM000673.1
About this gene
This gene has 21 transcripts (splice variants), 170 orthologues and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000321297.5 | ATG16L2-001 | 2243 | 619aa | ENSP00000326340.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31634 | F5H7B6 Q8NAA4 | NM_033388.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000534905.1 | ATG16L2-002 | 1614 | 164aa | ENSP00000441189.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GWZ9 F5H7B6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000541367.1 | ATG16L2-010 | 1575 | 450aa | ENSP00000437412.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YF72 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000540567.1 | ATG16L2-007 | 1492 | 117aa | ENSP00000443569.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H7B6 Q2VPK0 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000538973.1 | ATG16L2-009 | 1456 | 416aa | ENSP00000441989.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YG67 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000540222.1 | ATG16L2-011 | 1400 | 397aa | ENSP00000441747.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000535830.1 | ATG16L2-016 | 963 | 321aa | ENSP00000438474.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000541554.1 | ATG16L2-019 | 295 | 98aa | ENSP00000441132.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000544490.1 | ATG16L2-006 | 3731 | 106aa | ENSP00000442635.1 | Nonsense mediated decay | F5H7B6 | - | - | |
| ENST00000435507.2 | ATG16L2-003 | 2254 | 121aa | ENSP00000400705.2 | Nonsense mediated decay | F5GWM4 F5H7B6 | - | - | |
| ENST00000537837.1 | ATG16L2-018 | 784 | 74aa | ENSP00000437932.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000541999.1 | ATG16L2-015 | 537 | 98aa | ENSP00000442931.1 | Nonsense mediated decay | H0YGE3 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000451353.2 | ATG16L2-013 | 589 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000538842.1 | ATG16L2-021 | 385 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000536995.1 | ATG16L2-008 | 4577 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000439504.2 | ATG16L2-004 | 3841 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000542908.1 | ATG16L2-005 | 1178 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000537212.1 | ATG16L2-014 | 821 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000542481.1 | ATG16L2-020 | 571 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000545248.1 | ATG16L2-017 | 552 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000537143.1 | ATG16L2-012 | 519 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
