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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TSR1 ENSG00000167721

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Description

TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25542]

Gene Synonyms

FLJ10534, KIAA1401

Location

Chromosome 17: 2,225,797-2,240,801 reverse strand.

GRCh37:CM000679.1

About this gene

This gene has 5 transcripts (splice variants), 221 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000301364.5	TSR1-002	5188	804aa	ENSP00000301364.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32525	Q2NL82	NM_018128.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000576112.2	TSR1-007	1290	368aa	ENSP00000459012.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L1Q5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000571806.1	TSR1-004	794	70aa	ENSP00000461498.1	Nonsense mediated decay		I3L4T0	-	-
ENST00000575049.1	TSR1-005	387	53aa	ENSP00000461192.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000576202.1	TSR1-001	573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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