Gene: SMG8 ENSG00000167447

Description

SMG8 nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:25551]

Gene Synonyms

ABC2, C17orf71, FLJ10587, FLJ23205

Location

Chromosome 17: 57,286,761-57,292,608 forward strand.

GRCh37:CM000679.1

About this gene

This gene has 6 transcripts (splice variants), 211 orthologues and is associated with 2 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000543872.2	SMG8-001	3477	991aa	ENSP00000438748.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11615	Q8ND04	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000300917.5	SMG8-201	3263	991aa	ENSP00000300917.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11615	Q8ND04	NM_018149.6	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000578922.1	SMG8-002	2178	588aa	ENSP00000462119.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8ND04	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000582469.1	SMG8-003	1144	271aa	ENSP00000462931.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KTD7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000580798.1	SMG8-004	583	32aa	ENSP00000463175.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000580498.1	SMG8-005	785	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Gene: SMG8 ENSG00000167447

Summary