Description
methyl-CpG binding domain protein 6 [Source:HGNC Symbol;Acc:20445]
Gene Synonyms
KIAA1887
Location
Chromosome 12: 57,914,493-57,923,931 forward strand.
GRCh37:CM000674.1
About this gene
This gene has 15 transcripts (splice variants) and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000355673.3 | MBD6-001 | 4282 | 1003aa | ENSP00000347896.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8944 | F8VNX1 F8VPC4 F8VU14 F8VVK7 F8VZD7 Q96DN6 | NM_052897.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000431731.2 | MBD6-201 | 3592 | 1003aa | ENSP00000390211.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8944 | F8VNX1 F8VPC4 F8VU14 F8VVK7 F8VZD7 Q96DN6 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000546632.1 | MBD6-009 | 607 | 53aa | ENSP00000448202.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VNX1 F8VZD7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000546805.1 | MBD6-008 | 596 | 73aa | ENSP00000449603.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VNX1 F8VVK7 F8VZD7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000552163.1 | MBD6-015 | 570 | 190aa | ENSP00000450160.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000548887.1 | MBD6-005 | 568 | 148aa | ENSP00000448070.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VNX1 F8VU14 F8VVK7 F8VZD7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000549623.1 | MBD6-010 | 544 | 66aa | ENSP00000446481.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VPC4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000551351.1 | MBD6-006 | 532 | 53aa | ENSP00000450370.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VNX1 F8VZD7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000552659.1 | MBD6-013 | 530 | 176aa | ENSP00000446834.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YHD1 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000552255.1 | MBD6-011 | 509 | 45aa | ENSP00000447365.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VZD7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000547545.1 | MBD6-004 | 1884 | 504aa | ENSP00000449749.1 | Nonsense mediated decay | Q96DN6 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000549042.1 | MBD6-012 | 533 | 47aa | ENSP00000449541.1 | Nonsense mediated decay | F8VW40 | - | - | |
| ENST00000547844.1 | MBD6-016 | 387 | 27aa | ENSP00000447418.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000549231.1 | MBD6-007 | 538 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000548550.1 | MBD6-014 | 563 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
