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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: C18orf54 ENSG00000166845

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Description

chromosome 18 open reading frame 54 [Source:HGNC Symbol;Acc:13796]

Gene Synonyms

B9838, B9838V4, C18orf54, LAS2, MGC33382

Location

Chromosome 18: 51,884,287-51,911,588 forward strand.

GRCh37:CM000680.1

About this gene

This gene has 5 transcripts (splice variants) and 157 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000300091.5	C18orf54-001	5237	372aa	ENSP00000300091.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11956	I7GY12 I7HAS0 J3KRX3 J3KS56 Q8IYD9	NM_173529.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000382911.4	C18orf54-002	4056	533aa	ENSP00000372368.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I7HFJ6 J3KRX3 J3KS56 Q8IYD9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000578138.1	C18orf54-005	776	151aa	ENSP00000462317.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KRX3 J3KS56	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000579594.1	C18orf54-003	389	35aa	ENSP00000462201.1	Nonsense mediated decay		J3KRX3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000582188.1	C18orf54-004	462	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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