Description
cadherin 16, KSP-cadherin [Source:HGNC Symbol;Acc:1755]
Location
Chromosome 16: 66,942,025-66,952,887 reverse strand.
GRCh37:CM000678.1
About this gene
This gene has 9 transcripts (splice variants), 93 orthologues and 61 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000299752.4 | CDH16-001 | 2954 | 829aa | ENSP00000299752.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10823 | J3QLA1 O75309 | NM_004062.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000394055.3 | CDH16-002 | 2821 | 807aa | ENSP00000377619.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS56002 | J3QLA1 O75309 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000565796.1 | CDH16-006 | 2694 | 790aa | ENSP00000454784.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58471 | J3QLA1 O75309 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000570262.1 | CDH16-007 | 2604 | 749aa | ENSP00000456690.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BSG2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000568632.1 | CDH16-004 | 2526 | 732aa | ENSP00000455263.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58472 | O75309 | NM_001204746.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000567009.1 | CDH16-009 | 715 | 238aa | ENSP00000460891.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L418 J3QLA1 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000565235.2 | CDH16-008 | 582 | 124aa | ENSP00000463451.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QLA1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000567269.1 | CDH16-003 | 3539 | 175aa | ENSP00000455523.1 | Nonsense mediated decay | - | - | - | |
| ENST00000568698.1 | CDH16-005 | 2026 | 248aa | ENSP00000456891.1 | Nonsense mediated decay | H3BSV3 J3QLA1 | - | - |
