Description
nudE neurodevelopment protein 1-like 1 [Source:HGNC Symbol;Acc:17620]
Gene Synonyms
EOPA, MITAP1, NDE1L1, NDE2, NUDEL
Location
Chromosome 17: 8,316,449-8,393,729 forward strand.
GRCh37:CM000679.1
About this gene
This gene has 20 transcripts (splice variants), 271 orthologues and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000334527.7 | NDEL1-001 | 2372 | 345aa | ENSP00000333982.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11143 | B4DS41 J3KRK9 J3KSF2 J3KT16 J3QL31 J3QL85 Q9GZM8 | NM_030808.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000380025.4 | NDEL1-003 | 2181 | 269aa | ENSP00000369364.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6NIZ0 J3KRK9 J3KSF2 J3KT16 J3QL31 J3QL85 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000402554.3 | NDEL1-002 | 1858 | 328aa | ENSP00000384963.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32564 | J3KRK9 J3KSF2 J3KT16 J3QL31 J3QL85 Q9GZM8 | NM_001025579.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000299734.7 | NDEL1-201 | 1301 | 367aa | ENSP00000299734.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KRK9 J3KSF2 J3KT16 J3QL31 J3QL85 Q9GZM8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000580012.1 | NDEL1-014 | 790 | 59aa | ENSP00000463351.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KSF2 J3QL31 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000582277.1 | NDEL1-018 | 749 | 196aa | ENSP00000464441.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000582490.1 | NDEL1-013 | 602 | 72aa | ENSP00000462759.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KSF2 J3KT16 J3QL31 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000582812.1 | NDEL1-007 | 588 | 145aa | ENSP00000462052.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KRK9 J3KSF2 J3KT16 J3QL31 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000581679.1 | NDEL1-006 | 582 | 194aa | ENSP00000464634.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000584866.1 | NDEL1-012 | 577 | 33aa | ENSP00000462458.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KSF2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000582665.1 | NDEL1-011 | 555 | 158aa | ENSP00000463430.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KRK9 J3KSF2 J3KT16 J3QL31 J3QL85 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000585098.1 | NDEL1-019 | 454 | 85aa | ENSP00000463492.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KSF2 J3QLD0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000580237.1 | NDEL1-010 | 577 | 76aa | ENSP00000464154.1 | Nonsense mediated decay | J3QRD2 | - | - | |
| ENST00000583066.1 | NDEL1-016 | 567 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000579150.1 | NDEL1-008 | 565 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000581189.1 | NDEL1-015 | 560 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000579880.1 | NDEL1-009 | 551 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000578172.1 | NDEL1-005 | 3927 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000583683.1 | NDEL1-004 | 1802 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000580738.1 | NDEL1-017 | 552 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
