Description
polycystic kidney disease 1-like 2 [Source:HGNC Symbol;Acc:21715]
Gene Synonyms
KIAA1879, PC1L2
Location
Chromosome 16: 81,134,480-81,253,975 reverse strand.
GRCh37:CM000678.1
About this gene
This gene has 12 transcripts (splice variants), 311 orthologues and 10 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000527937.1 | PKD1L2-007 | 4165 | 240aa | ENSP00000432818.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7Z442 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000337114.4 | PKD1L2-201 | 3427 | 991aa | ENSP00000337397.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q6AI51 Q7Z442 | NM_001076780.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000526632.1 | PKD1L2-005 | 2006 | 519aa | ENSP00000436389.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q6AI51 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000531391.1 | PKD1L2-006 | 1488 | 306aa | ENSP00000436309.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS61999 | Q6AI51 Q7Z442 | NM_001278423.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000525539.1 | PKD1L2-001 | 7379 | 2459aa | ENSP00000434417.1 | Pseudogene owing to a SNP/indel but in other individuals/haplotypes/strains the gene is translated.Polymorphic pseudogene | Q6AI51 | NM_052892.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000533478.1 | PKD1L2-004 | 5669 | 1774aa | ENSP00000434644.1 | Pseudogene owing to a SNP/indel but in other individuals/haplotypes/strains the gene is translated.Polymorphic pseudogene | CCDS61998 | Q6AI51 | NM_001278425.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000534142.1 | PKD1L2-009 | 2012 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000529791.1 | PKD1L2-011 | 552 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000299598.7 | PKD1L2-003 | 5818 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000534447.1 | PKD1L2-010 | 5330 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000530363.1 | PKD1L2-008 | 1608 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000529079.1 | PKD1L2-012 | 574 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
