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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SYNPO2L ENSG00000166317

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Description

synaptopodin 2-like [Source:HGNC Symbol;Acc:23532]

Gene Synonyms

FLJ12921

Location

Chromosome 10: 75,404,639-75,423,561 reverse strand.

GRCh37:CM000672.1

About this gene

This gene has 3 transcripts (splice variants), 274 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394810.2	SYNPO2L-003	4921	977aa	ENSP00000378289.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44438	Q9H987 U3KQD0	NM_001114133.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000372873.4	SYNPO2L-001	4121	753aa	ENSP00000361964.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7331	Q9H987	NM_024875.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000606523.1	SYNPO2L-004	551	115aa	ENSP00000475768.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQD0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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