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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PDZRN4 ENSG00000165966

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Description

PDZ domain containing ring finger 4 [Source:HGNC Symbol;Acc:30552]

Gene Synonyms

DKFZp434B0417, FLJ33777, IMAGE5767589, LNX4, SAMCAP3L, SEMCAP3L

Location

Chromosome 12: 41,582,250-41,968,392 forward strand.

GRCh37:CM000674.1

About this gene

This gene has 4 transcripts (splice variants), 261 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000402685.2	PDZRN4-001	3347	1036aa	ENSP00000384197.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53777	B3KT02 Q6ZMN7	NM_001164595.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000298919.7	PDZRN4-003	3411	776aa	ENSP00000298919.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KT02 Q6ZMN7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000539469.2	PDZRN4-002	3041	778aa	ENSP00000439990.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8739	B3KT02 Q6ZMN7	NM_013377.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000548316.1	PDZRN4-004	2971	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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