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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CLMN ENSG00000165959

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Description

calmin (calponin-like, transmembrane) [Source:HGNC Symbol;Acc:19972]

Gene Synonyms

FLJ12383, KIAA0500, KIAA1188

Location

Chromosome 14: 95,648,277-95,786,243 reverse strand.

GRCh37:CM000676.1

About this gene

This gene has 9 transcripts (splice variants), 233 orthologues and 36 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000298912.4	CLMN-001	12747	1002aa	ENSP00000298912.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9933	A0PJD0 G3V4C0 G3V5U3 Q96JQ2	NM_024734.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000555336.2	CLMN-003	718	132aa	ENSP00000451705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4C0 G3V5U3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000555615.1	CLMN-010	685	101aa	ENSP00000452525.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V5U3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000556441.1	CLMN-005	452	67aa	ENSP00000452305.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V5E0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000553733.1	CLMN-009	565	97aa	ENSP00000451189.1	Nonsense mediated decay		G3V3D8	-	-
ENST00000557215.1	CLMN-008	515	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556454.1	CLMN-002	3023	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556416.1	CLMN-007	1772	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000557696.1	CLMN-006	746	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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