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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ARHGAP42 ENSG00000165895

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Description

Rho GTPase activating protein 42 [Source:HGNC Symbol;Acc:26545]

Gene Synonyms

FLJ32810, GRAF3

Location

Chromosome 11: 100,558,384-100,862,668 forward strand.

GRCh37:CM000673.1

About this gene

This gene has 8 transcripts (splice variants), 263 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000298815.8	ARHGAP42-201	4752	874aa	ENSP00000298815.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NI28 H0YDU1	NM_152432.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000524892.2	ARHGAP42-003	5685	840aa	ENSP00000431776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJK4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000531183.1	ARHGAP42-006	690	230aa	ENSP00000434304.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YDU1	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000529535.1	ARHGAP42-001	1843	443aa	ENSP00000435961.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000534060.1	ARHGAP42-007	501	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529406.1	ARHGAP42-008	449	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525558.1	ARHGAP42-005	439	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000524649.1	ARHGAP42-009	489	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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