Description
PBX/knotted 1 homeobox 2 [Source:HGNC Symbol;Acc:16714]
Gene Synonyms
PREP2
Location
Chromosome 11: 125,034,583-125,303,285 forward strand.
GRCh37:CM000673.1
About this gene
This gene has 15 transcripts (splice variants), 214 orthologues and 13 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000298282.9 | PKNOX2-001 | 3687 | 472aa | ENSP00000298282.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41730 | B7ZAF3 E9PKL2 E9PRB6 H0YLX0 Q96KN3 | NM_022062.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000542175.1 | PKNOX2-201 | 1870 | 408aa | ENSP00000441470.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GZ15 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000558705.1 | PKNOX2-012 | 554 | 98aa | ENSP00000453374.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PKL2 E9PRB6 H0YLX0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000527238.1 | PKNOX2-007 | 545 | 39aa | ENSP00000431599.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PKL2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000531212.1 | PKNOX2-008 | 521 | 40aa | ENSP00000434255.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PKL2 E9PRB6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000532623.1 | PKNOX2-003 | 1654 | 40aa | ENSP00000434377.1 | Nonsense mediated decay | E9PQS4 | - | - | |
| ENST00000530517.1 | PKNOX2-002 | 1709 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000531116.1 | PKNOX2-004 | 1673 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000558729.1 | PKNOX2-016 | 604 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000559662.1 | PKNOX2-014 | 588 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000557814.1 | PKNOX2-015 | 559 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000561399.1 | PKNOX2-011 | 521 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000561115.1 | PKNOX2-010 | 340 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000526955.1 | PKNOX2-006 | 4531 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000561298.1 | PKNOX2-013 | 591 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
