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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: GTF2A1 ENSG00000165417

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Description

general transcription factor IIA, 1, 19/37kDa [Source:HGNC Symbol;Acc:4646]

Gene Synonyms

TF2A1, TFIIA, TFIIA-42, TFIIAL

Location

Chromosome 14: 81,641,796-81,687,721 reverse strand.

GRCh37:CM000676.1

About this gene

This gene has 4 transcripts (splice variants), 213 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000553612.1	GTF2A1-001	6306	376aa	ENSP00000452454.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9873	P52655	NM_015859.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000434192.2	GTF2A1-003	1199	337aa	ENSP00000409492.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9874	P52655	NM_201595.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000298173.3	GTF2A1-004	1677	59aa	ENSP00000298173.3	Nonsense mediated decay		J3KNC0	-	-
ENST00000556268.1	GTF2A1-002	864	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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