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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SAMD3 ENSG00000164483

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Description

sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:21574]

Gene Synonyms

FLJ34032, bA73O6.2

Location

Chromosome 6: 130,465,460-130,686,570 reverse strand.

GRCh37:CM000668.1

About this gene

This gene has 15 transcripts (splice variants), 121 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368134.2	SAMD3-001	2377	520aa	ENSP00000357116.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34539	E9PS85 Q8N6K7	NM_001258275.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000532763.1	SAMD3-007	3690	275aa	ENSP00000436088.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PR45	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000439090.2	SAMD3-002	2093	520aa	ENSP00000403565.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34539	E9PS85 Q8N6K7	NM_001017373.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000437477.2	SAMD3-005	2028	520aa	ENSP00000391163.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34539	E9PS85 Q8N6K7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000457563.2	SAMD3-006	1877	544aa	ENSP00000402092.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS64525	E9PS85 J3KQK4	NM_001277185.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000324172.6	SAMD3-004	993	221aa	ENSP00000324874.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PS85 Q8N6K7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000532309.1	SAMD3-013	679	210aa	ENSP00000436115.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PR28	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000531544.1	SAMD3-011	592	173aa	ENSP00000435875.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PS85	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000529723.1	SAMD3-012	545	165aa	ENSP00000434139.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PRU9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000463253.2	SAMD3-003	322	77aa	ENSP00000435879.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000524930.1	SAMD3-009	929	37aa	ENSP00000436997.1	Nonsense mediated decay		E9PPN0	-	-
ENST00000533296.1	SAMD3-008	1436	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000528422.1	SAMD3-014	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529119.1	SAMD3-010	439	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526886.1	SAMD3-015	454	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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