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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: HMGB2 ENSG00000164104

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Description

high mobility group box 2 [Source:HGNC Symbol;Acc:5000]

Gene Synonyms

HMG2

Location

Chromosome 4: 174,252,846-174,256,276 reverse strand.

GRCh37:CM000666.1

About this gene

This gene has 5 transcripts (splice variants), 266 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296503.5	HMGB2-001	1889	209aa	ENSP00000296503.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3816	D6R9A6 P26583 Q5U071	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000446922.2	HMGB2-003	1175	209aa	ENSP00000393448.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3816	D6R9A6 P26583 Q5U071	NM_002129.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000438704.2	HMGB2-004	1032	209aa	ENSP00000404912.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3816	D6R9A6 P26583 Q5U071	NM_001130689.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000506267.1	HMGB2-005	629	134aa	ENSP00000423001.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9A6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000511316.1	HMGB2-002	1841	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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