Description
U2 snRNP-associated SURP domain containing [Source:HGNC Symbol;Acc:30855]
Gene Synonyms
KIAA0332, SR140, fSAPa
Location
Chromosome 3: 142,683,339-142,779,567 forward strand.
GRCh37:CM000665.1
About this gene
This gene has 18 transcripts (splice variants) and 209 orthologues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000473835.2 | U2SURP-001 | 7276 | 1029aa | ENSP00000418563.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46928 | C9J5L1 C9JB80 C9JDJ7 O15042 | NM_001080415.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000397933.2 | U2SURP-201 | 7420 | 620aa | ENSP00000381027.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JB80 O15042 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000493598.2 | U2SURP-022 | 3491 | 1028aa | ENSP00000422011.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J5L1 C9JDJ7 E7ET15 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000480029.1 | U2SURP-005 | 2855 | 487aa | ENSP00000417441.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JB80 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000467348.1 | U2SURP-019 | 1267 | 290aa | ENSP00000418220.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000600150.1 | U2SURP-008 | 725 | 125aa | ENSP00000475195.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | U3KPT1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000493782.1 | U2SURP-006 | 588 | 161aa | ENSP00000418465.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J5L1 C9JDJ7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000465175.1 | U2SURP-007 | 571 | 130aa | ENSP00000420575.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JDJ7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000463563.2 | U2SURP-004 | 4364 | 439aa | ENSP00000420210.2 | Nonsense mediated decay | C9J5L1 C9JDJ7 H0Y8D9 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000488497.3 | U2SURP-002 | 3557 | 425aa | ENSP00000430816.1 | Nonsense mediated decay | C9J5L1 C9JDJ7 E7EW00 | - | - | |
| ENST00000485374.1 | U2SURP-010 | 470 | 94aa | ENSP00000417831.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000461591.1 | U2SURP-003 | 1580 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000472373.1 | U2SURP-014 | 1182 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000470400.1 | U2SURP-009 | 881 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000488587.1 | U2SURP-012 | 866 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000491827.1 | U2SURP-011 | 824 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000461844.1 | U2SURP-018 | 556 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000496100.1 | U2SURP-017 | 540 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
