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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SYNPR ENSG00000163630

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Description

synaptoporin [Source:HGNC Symbol;Acc:16507]

Gene Synonyms

MGC26651, SPO

Location

Chromosome 3: 63,213,991-63,602,597 forward strand.

GRCh37:CM000665.1

About this gene

This gene has 15 transcripts (splice variants), 275 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000478300.1	SYNPR-001	2709	285aa	ENSP00000418994.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46859	B7Z9J3 Q8TBG9	NM_001130003.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000295894.5	SYNPR-004	2607	265aa	ENSP00000295894.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46860	B7Z9J3 Q8TBG9	NM_144642.4	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000479198.1	SYNPR-006	2436	202aa	ENSP00000418929.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0A2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000460711.1	SYNPR-007	2383	276aa	ENSP00000418701.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KVD8 B7Z9J3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000465156.1	SYNPR-015	829	201aa	ENSP00000418123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J976	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000468110.1	SYNPR-003	1304	75aa	ENSP00000419441.1	Nonsense mediated decay		F8WF23	-	-
ENST00000498449.1	SYNPR-005	1296	55aa	ENSP00000420383.1	Nonsense mediated decay		F8WDF9	-	-
ENST00000450542.2	SYNPR-002	1004	34aa	ENSP00000402121.2	Nonsense mediated decay		F8WE43	-	-
ENST00000472899.1	SYNPR-013	527	51aa	ENSP00000420623.1	Nonsense mediated decay		F8WDB8	-	-
ENST00000478744.1	SYNPR-014	805	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493532.1	SYNPR-011	703	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478456.1	SYNPR-008	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496889.1	SYNPR-009	553	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460142.2	SYNPR-010	526	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467934.1	SYNPR-012	506	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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