Description
synaptoporin [Source:HGNC Symbol;Acc:16507]
Gene Synonyms
MGC26651, SPO
Location
Chromosome 3: 63,213,991-63,602,597 forward strand.
GRCh37:CM000665.1
About this gene
This gene has 15 transcripts (splice variants), 275 orthologues and 3 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000478300.1 | SYNPR-001 | 2709 | 285aa | ENSP00000418994.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46859 | B7Z9J3 Q8TBG9 | NM_001130003.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000295894.5 | SYNPR-004 | 2607 | 265aa | ENSP00000295894.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46860 | B7Z9J3 Q8TBG9 | NM_144642.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000479198.1 | SYNPR-006 | 2436 | 202aa | ENSP00000418929.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J0A2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000460711.1 | SYNPR-007 | 2383 | 276aa | ENSP00000418701.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KVD8 B7Z9J3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000465156.1 | SYNPR-015 | 829 | 201aa | ENSP00000418123.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J976 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000468110.1 | SYNPR-003 | 1304 | 75aa | ENSP00000419441.1 | Nonsense mediated decay | F8WF23 | - | - | |
| ENST00000498449.1 | SYNPR-005 | 1296 | 55aa | ENSP00000420383.1 | Nonsense mediated decay | F8WDF9 | - | - | |
| ENST00000450542.2 | SYNPR-002 | 1004 | 34aa | ENSP00000402121.2 | Nonsense mediated decay | F8WE43 | - | - | |
| ENST00000472899.1 | SYNPR-013 | 527 | 51aa | ENSP00000420623.1 | Nonsense mediated decay | F8WDB8 | - | - | |
| ENST00000478744.1 | SYNPR-014 | 805 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000493532.1 | SYNPR-011 | 703 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000478456.1 | SYNPR-008 | 566 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000496889.1 | SYNPR-009 | 553 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000460142.2 | SYNPR-010 | 526 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000467934.1 | SYNPR-012 | 506 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
