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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CCDC138 ENSG00000163006

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Description

coiled-coil domain containing 138 [Source:HGNC Symbol;Acc:26531]

Gene Synonyms

FLJ32745

Location

Chromosome 2: 109,403,213-109,501,933 forward strand.

GRCh37:CM000664.1

About this gene

This gene has 8 transcripts (splice variants) and 124 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295124.4	CCDC138-001	2383	665aa	ENSP00000295124.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2080	Q96M89	NM_144978.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000412964.2	CCDC138-002	2250	577aa	ENSP00000411800.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96M89	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000456512.1	CCDC138-006	1056	352aa	ENSP00000392385.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000608781.1	CCDC138-007	540	39aa	ENSP00000477316.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000409529.2	CCDC138-003	2364	104aa	ENSP00000386418.2	Nonsense mediated decay		H7BZ08	-	-
ENST00000447782.1	CCDC138-004	539	45aa	ENSP00000407328.1	Nonsense mediated decay		F8WF51	-	-
ENST00000470608.1	CCDC138-005	427	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000609740.1	CCDC138-008	3285	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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