Description
nicastrin [Source:HGNC Symbol;Acc:17091]
Gene Synonyms
APH2, KIAA0253
Location
Chromosome 1: 160,313,062-160,328,742 forward strand.
GRCh37:CM000663.1
About this gene
This gene has 17 transcripts (splice variants) and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000294785.5 | NCSTN-001 | 2936 | 709aa | ENSP00000294785.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1203 | E7ENA9 Q92542 | NM_015331.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000368063.1 | NCSTN-002 | 3031 | 689aa | ENSP00000357042.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7ENA9 Q92542 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000392212.4 | NCSTN-202 | 2745 | 689aa | ENSP00000376047.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7ENA9 Q92542 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000535857.1 | NCSTN-203 | 1979 | 571aa | ENSP00000442605.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6Y097 Q5T209 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000368065.4 | NCSTN-201 | 1912 | 451aa | ENSP00000357044.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7ENA9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000424645.1 | NCSTN-008 | 958 | 319aa | ENSP00000388118.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000435149.1 | NCSTN-011 | 824 | 275aa | ENSP00000407849.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000421914.1 | NCSTN-006 | 776 | 255aa | ENSP00000390409.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5T209 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000438008.1 | NCSTN-003 | 702 | 232aa | ENSP00000389370.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5T210 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000424754.1 | NCSTN-012 | 659 | 219aa | ENSP00000410124.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5T205 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000437169.1 | NCSTN-007 | 448 | 134aa | ENSP00000415442.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5T211 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000459963.1 | NCSTN-009 | 1246 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000469159.1 | NCSTN-013 | 856 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000467837.1 | NCSTN-004 | 726 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000491390.1 | NCSTN-014 | 592 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000465223.1 | NCSTN-010 | 545 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000491332.1 | NCSTN-005 | 490 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
