Description
syntaxin 5 [Source:HGNC Symbol;Acc:11440]
Gene Synonyms
SED5, STX5A
Location
Chromosome 11: 62,574,369-62,599,560 reverse strand.
GRCh37:CM000673.1
About this gene
This gene has 9 transcripts (splice variants), 208 orthologues and 12 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000294179.3 | STX5-001 | 1794 | 355aa | ENSP00000294179.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8038 | B4DKR0 Q13190 | NM_003164.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000377897.4 | STX5-002 | 1785 | 321aa | ENSP00000367129.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58140 | F8W8Q9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000394690.1 | STX5-005 | 1568 | 301aa | ENSP00000378182.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DKR0 Q13190 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000541317.1 | STX5-201 | 991 | 259aa | ENSP00000441428.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DKR0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000431400.1 | STX5-007 | 723 | 158aa | ENSP00000414289.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000491231.1 | STX5-004 | 1719 | 250aa | ENSP00000432748.1 | Nonsense mediated decay | E9PNU4 | - | - | |
| ENST00000492066.1 | STX5-003 | 1627 | 81aa | ENSP00000434107.1 | Nonsense mediated decay | E9PRW9 | - | - | |
| ENST00000488303.1 | STX5-008 | 604 | 67aa | ENSP00000435973.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000486437.1 | STX5-006 | 560 | 78aa | ENSP00000436495.1 | Nonsense mediated decay | E9PP18 | - | - |
