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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TTC9C ENSG00000162222

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Description

tetratricopeptide repeat domain 9C [Source:HGNC Symbol;Acc:28432]

Gene Synonyms

MGC29649

Location

Chromosome 11: 62,495,541-62,507,765 forward strand.

GRCh37:CM000673.1

About this gene

This gene has 7 transcripts (splice variants) and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000513247.2	TTC9C-201	1809	215aa	ENSP00000444031.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EST3 Q8WYY7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000316461.4	TTC9C-001	1080	171aa	ENSP00000325266.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8033	E9PKV8 H0YDR3 Q8N5M4	NM_173810.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532583.1	TTC9C-002	858	171aa	ENSP00000434340.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8033	E9PKV8 H0YDR3 Q8N5M4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530625.1	TTC9C-004	606	140aa	ENSP00000435282.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKV8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000294161.6	TTC9C-003	1833	82aa	ENSP00000294161.6	Nonsense mediated decay		E7EST3	-	-
ENST00000532276.1	TTC9C-005	627	69aa	ENSP00000434137.1	Nonsense mediated decay		H0YDR3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000601045.1	TTC9C-006	346	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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