Description
ClpB caseinolytic peptidase B homolog (E. coli) [Source:HGNC Symbol;Acc:30664]
Gene Synonyms
FLJ13152, HSP78, SKD3
Location
Chromosome 11: 72,003,469-72,145,692 reverse strand.
GRCh37:CM000673.1
About this gene
This gene has 14 transcripts (splice variants), 200 orthologues and is associated with 4 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000294053.3 | CLPB-001 | 3240 | 707aa | ENSP00000294053.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8215 | F5H392 Q9H078 | NM_030813.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000538039.1 | CLPB-003 | 3078 | 677aa | ENSP00000441518.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58154 | B4DXW4 F5H7A5 Q9H078 | NM_001258392.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000535990.1 | CLPB-006 | 2203 | 712aa | ENSP00000443822.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YGM0 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000437826.2 | CLPB-201 | 2203 | 662aa | ENSP00000407296.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58152 | Q9H078 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000543042.1 | CLPB-004 | 2133 | 506aa | ENSP00000439746.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DXW4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000340729.5 | CLPB-002 | 2071 | 648aa | ENSP00000340385.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58153 | Q9H078 | NM_001258393.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000538021.1 | CLPB-007 | 1108 | 315aa | ENSP00000445180.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7Z777 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000544382.1 | CLPB-013 | 982 | 327aa | ENSP00000438372.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000445069.2 | CLPB-009 | 815 | 213aa | ENSP00000473985.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | S4R372 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000544683.1 | CLPB-010 | 624 | 152aa | ENSP00000442651.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H7A5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000539148.1 | CLPB-011 | 564 | 149aa | ENSP00000445327.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H392 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000535477.1 | CLPB-005 | 2047 | 501aa | ENSP00000440423.1 | Nonsense mediated decay | F5GX99 F5H7A5 | - | - | |
| ENST00000536297.1 | CLPB-012 | 479 | 44aa | ENSP00000441804.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000542555.1 | CLPB-014 | 421 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
