Description
La ribonucleoprotein domain family, member 4 [Source:HGNC Symbol;Acc:24320]
Gene Synonyms
PP13296
Location
Chromosome 12: 50,786,166-50,873,787 forward strand.
GRCh37:CM000674.1
About this gene
This gene has 18 transcripts (splice variants), 308 orthologues and 6 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000398473.2 | LARP4-002 | 6427 | 724aa | ENSP00000381490.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41782 | E5RHZ8 E5RJH8 F8VSA9 F8VXL0 F8VZ60 F8W1I4 Q71RC2 Q96J85 | NM_199188.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000293618.8 | LARP4-201 | 6296 | 653aa | ENSP00000293618.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53790 | E5RHZ8 E5RJH8 F8VSA9 F8VXL0 F8VZ60 F8W1I4 Q71RC2 | NM_001170808.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000429001.3 | LARP4-015 | 4000 | 730aa | ENSP00000415464.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RHZ8 E5RJH8 F8VSA9 F8VXL0 F8VZ60 F8W1I4 Q71RC2 Q96J85 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000347328.5 | LARP4-001 | 3621 | 653aa | ENSP00000340901.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44880 | E5RHZ8 E5RJH8 F8VSA9 F8VXL0 F8VZ60 F8W1I4 Q71RC2 | NM_199190.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000518444.1 | LARP4-003 | 2853 | 723aa | ENSP00000429077.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44879 | E5RHZ8 E5RJH8 F8VSA9 F8VXL0 F8VZ60 F8W1I4 Q71RC2 Q96J85 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000520064.2 | LARP4-018 | 2068 | 491aa | ENSP00000429631.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000518561.1 | LARP4-006 | 1578 | 375aa | ENSP00000430851.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RHZ8 E5RJH8 F8VSA9 F8VXL0 F8VZ60 F8W1I4 Q96J85 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000522085.1 | LARP4-004 | 1577 | 445aa | ENSP00000429781.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53789 | E5RHZ8 E5RJH8 F8VSA9 F8VXL0 F8VZ60 F8W1I4 Q71RC2 Q96J85 | NM_001170804.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000548993.1 | LARP4-014 | 790 | 125aa | ENSP00000446966.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RHZ8 E5RJH8 F8VSA9 F8VXL0 F8VZ60 F8W1I4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000552445.1 | LARP4-012 | 722 | 61aa | ENSP00000447397.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RJH8 F8VSA9 F8VXL0 F8VZ60 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000523389.1 | LARP4-007 | 588 | 37aa | ENSP00000430551.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RJH8 F8VXL0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000548697.1 | LARP4-013 | 587 | 36aa | ENSP00000449090.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VXL0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000551886.1 | LARP4-016 | 586 | 169aa | ENSP00000447408.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RJH8 F8VXL0 F8W1Z5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000548174.1 | LARP4-011 | 584 | 115aa | ENSP00000446540.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RJH8 F8VNV1 F8VXL0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000550260.1 | LARP4-017 | 583 | 191aa | ENSP00000448756.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RJH8 F8VXL0 F8VY40 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000550522.1 | LARP4-010 | 567 | 56aa | ENSP00000448180.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RJH8 F8VSA9 F8VXL0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000517559.1 | LARP4-008 | 559 | 84aa | ENSP00000428516.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RHZ8 E5RJH8 F8VSA9 F8VXL0 F8VZ60 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000521120.1 | LARP4-009 | 987 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
