Description
vacuolar protein sorting 28 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:18178]
Location
Chromosome 8: 145,649,000-145,653,931 reverse strand.
GRCh37:CM000670.1
View alleles of this gene on alternative sequences
About this gene
This gene has 16 transcripts (splice variants), 1 gene allele and 189 orthologues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000377348.2 | VPS28-202 | 1062 | 233aa | ENSP00000366565.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS34967 | E9PI55 E9PLM9 E9PQR7 E9PR04 Q9UK41 | NM_183057.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000529182.1 | VPS28-002 | 1010 | 233aa | ENSP00000434556.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS34967 | E9PI55 E9PLM9 E9PQR7 E9PR04 Q9UK41 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000292510.4 | VPS28-201 | 944 | 221aa | ENSP00000292510.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6425 | E9PI55 E9PLM9 E9PQR7 E9PR04 Q548N1 Q9UK41 | NM_016208.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000526054.1 | VPS28-003 | 892 | 221aa | ENSP00000434064.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6425 | E9PI55 E9PLM9 E9PQR7 E9PR04 Q548N1 Q9UK41 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000533806.1 | VPS28-011 | 650 | 185aa | ENSP00000431243.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PI55 E9PLM9 E9PM90 E9PR04 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000531032.1 | VPS28-012 | 573 | 161aa | ENSP00000434393.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PI55 E9PLM9 E9PQR7 E9PR04 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000530790.1 | VPS28-014 | 561 | 53aa | ENSP00000432395.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PLM9 E9PR04 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000530983.1 | VPS28-005 | 2337 | 62aa | ENSP00000433652.1 | Nonsense mediated decay | E9PJY2 | - | - | |
| ENST00000526204.1 | VPS28-008 | 2120 | 35aa | ENSP00000433228.1 | Nonsense mediated decay | E9PLM9 | - | - | |
| ENST00000526977.1 | VPS28-004 | 2036 | 62aa | ENSP00000433250.1 | Nonsense mediated decay | E9PJY2 | - | - | |
| ENST00000530836.1 | VPS28-006 | 1613 | 35aa | ENSP00000436102.1 | Nonsense mediated decay | E9PLM9 | - | - | |
| ENST00000527797.2 | VPS28-007 | 1609 | 65aa | ENSP00000436509.2 | Nonsense mediated decay | E9PI55 E9PLM9 E9PR04 | - | - | |
| ENST00000526734.1 | VPS28-013 | 570 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000524521.1 | VPS28-015 | 564 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000528142.1 | VPS28-001 | 1821 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000531924.1 | VPS28-016 | 695 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
