Description
lymphocyte antigen 6 complex, locus E [Source:HGNC Symbol;Acc:6727]
Gene Synonyms
9804, RIG-E, RIGE, SCA-2, SCA2, TSA-1, TSA1
Location
Chromosome 8: 144,099,399-144,105,249 forward strand.
GRCh37:CM000670.1
About this gene
This gene has 15 transcripts (splice variants), 129 orthologues and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000520466.1 | LY6E-016 | 1419 | 131aa | ENSP00000428572.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6394 | Q16553 Q7Z787 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000517503.1 | LY6E-004 | 1335 | 147aa | ENSP00000428427.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EWF8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000521699.1 | LY6E-008 | 1256 | 131aa | ENSP00000427915.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6394 | Q16553 Q7Z787 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000292494.6 | LY6E-001 | 1181 | 131aa | ENSP00000292494.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6394 | Q16553 Q7Z787 | NM_002346.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000429120.2 | LY6E-002 | 1173 | 131aa | ENSP00000414307.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6394 | Q16553 Q7Z787 | NM_001127213.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000521182.1 | LY6E-003 | 1079 | 41aa | ENSP00000430770.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RI58 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000519546.1 | LY6E-013 | 971 | 66aa | ENSP00000428467.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RI33 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000522024.1 | LY6E-007 | 868 | 131aa | ENSP00000428442.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6394 | Q16553 Q7Z787 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000522971.1 | LY6E-009 | 857 | 131aa | ENSP00000428159.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6394 | Q16553 Q7Z787 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000521003.1 | LY6E-011 | 740 | 131aa | ENSP00000428169.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6394 | Q16553 Q7Z787 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000519611.1 | LY6E-010 | 635 | 66aa | ENSP00000430796.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RI33 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000522528.1 | LY6E-005 | 606 | 41aa | ENSP00000428365.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RI58 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000520531.1 | LY6E-012 | 490 | 73aa | ENSP00000430131.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RGI6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000523847.1 | LY6E-014 | 427 | 66aa | ENSP00000430700.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RIQ1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000519615.1 | LY6E-015 | 656 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
