Description
cleavage and polyadenylation specific factor 4, 30kDa [Source:HGNC Symbol;Acc:2327]
Gene Synonyms
CPSF30, NAR, NEB1
Location
Chromosome 7: 99,036,545-99,054,994 forward strand.
GRCh37:CM000669.1
About this gene
This gene has 13 transcripts (splice variants) and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000436336.2 | CPSF4-001 | 1738 | 244aa | ENSP00000395311.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS47652 | B7Z7B0 C9K0K2 O95639 | NM_006693.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000292476.5 | CPSF4-003 | 1691 | 269aa | ENSP00000292476.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5664 | C9K0K2 O95639 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000451876.1 | CPSF4-002 | 1644 | 211aa | ENSP00000396060.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JEV9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000441580.1 | CPSF4-004 | 942 | 191aa | ENSP00000402224.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z7B0 C9K0K2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000412686.1 | CPSF4-010 | 745 | 112aa | ENSP00000401150.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9K0K2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000452047.1 | CPSF4-007 | 687 | 229aa | ENSP00000392584.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C016 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000440514.1 | CPSF4-011 | 578 | 193aa | ENSP00000415188.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000430038.1 | CPSF4-005 | 735 | 44aa | ENSP00000401496.1 | Nonsense mediated decay | F8WEL7 | - | - | |
| ENST00000471455.1 | CPSF4-008 | 569 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000465132.1 | CPSF4-009 | 927 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000484112.1 | CPSF4-006 | 825 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000469897.1 | CPSF4-012 | 689 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000482251.2 | CPSF4-013 | 574 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
