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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CCDC117 ENSG00000159873

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Description

coiled-coil domain containing 117 [Source:HGNC Symbol;Acc:26599]

Gene Synonyms

FLJ33814, dJ366L4.1

Location

Chromosome 22: 29,168,662-29,185,283 forward strand.

GRCh37:CM000684.1

About this gene

This gene has 7 transcripts (splice variants) and 186 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000249064.4	CCDC117-001	3985	279aa	ENSP00000249064.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13846	B0QYH3 B7Z820 F8WBN8 Q8IWD4	NM_173510.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000421503.2	CCDC117-201	1137	204aa	ENSP00000387827.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63435	B7Z2V1 F8WBN8	NM_001284264.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000443309.2	CCDC117-202	1085	147aa	ENSP00000399363.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QYH3 B7Z820	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000448492.2	CCDC117-203	1035	261aa	ENSP00000389478.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63436	B0QYH1 B0QYH3 B7Z820 B7Z860 F8WBN8	NM_001284263.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000432510.1	CCDC117-004	568	70aa	ENSP00000415728.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QYH3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000444523.1	CCDC117-002	463	113aa	ENSP00000399536.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QYH1 F8WBN8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000453543.1	CCDC117-003	1026	62aa	ENSP00000411668.1	Nonsense mediated decay		F8WBN8	-	-

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Summary

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