Gene: UBR1 ENSG00000159459

Description

ubiquitin protein ligase E3 component n-recognin 1 [Source:HGNC Symbol;Acc:16808]

Gene Synonyms

JBS

Location

Chromosome 15: 43,235,095-43,398,311 reverse strand.

GRCh37:CM000677.1

About this gene

This gene has 12 transcripts (splice variants), 216 orthologues, 2 paralogues and is associated with 4 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000290650.4	UBR1-001	7761	1749aa	ENSP00000290650.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10091	Q8IWV7	NM_174916.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000382177.2	UBR1-201	7684	803aa	ENSP00000371612.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8IWV7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000569243.1	UBR1-005	702	172aa	ENSP00000457573.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000569066.1	UBR1-003	2250	148aa	ENSP00000456327.1	Nonsense mediated decay		Q8IWV7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000564540.1	UBR1-004	735	71aa	ENSP00000457879.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000569971.1	UBR1-010	721	72aa	ENSP00000455759.1	Nonsense mediated decay		H3BQF8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000569337.1	UBR1-011	549	62aa	ENSP00000454962.1	Nonsense mediated decay		H3BNQ6	-	-
ENST00000563239.1	UBR1-009	545	31aa	ENSP00000456502.1	Nonsense mediated decay		H3BS20	-	-
ENST00000568782.1	UBR1-006	615	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000546274.2	UBR1-002	3332	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000566493.1	UBR1-007	598	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000562173.1	UBR1-008	597	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: UBR1 ENSG00000159459

Summary