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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SCUBE1 ENSG00000159307

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Description

signal peptide, CUB domain, EGF-like 1 [Source:HGNC Symbol;Acc:13441]

Location

Chromosome 22: 43,593,289-43,739,394 reverse strand.

GRCh37:CM000684.1

About this gene

This gene has 7 transcripts (splice variants), 203 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000360835.4	SCUBE1-001	9808	988aa	ENSP00000354080.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14048	Q8IWY4	NM_173050.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000290460.7	SCUBE1-003	2258	347aa	ENSP00000290460.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AH90	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000449304.1	SCUBE1-009	524	175aa	ENSP00000395327.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000470433.1	SCUBE1-008	544	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461595.1	SCUBE1-006	530	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477991.1	SCUBE1-007	489	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480833.1	SCUBE1-005	282	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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