Description
tetraspanin 18 [Source:HGNC Symbol;Acc:20660]
Gene Synonyms
TSPAN
Location
Chromosome 11: 44,748,015-44,953,972 forward strand.
GRCh37:CM000673.1
About this gene
This gene has 13 transcripts (splice variants), 254 orthologues and 32 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000340160.3 | TSPAN18-201 | 4229 | 248aa | ENSP00000339820.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7910 | E9PPB7 Q96SJ8 | NM_130783.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000520358.2 | TSPAN18-001 | 3316 | 248aa | ENSP00000429993.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7910 | E9PPB7 Q96SJ8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000518429.2 | TSPAN18-002 | 1184 | 271aa | ENSP00000429020.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PPB7 Q8WUV1 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000520999.2 | TSPAN18-009 | 871 | 157aa | ENSP00000427942.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RFP3 E5RFV0 E9PKD8 E9PPB7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000533080.1 | TSPAN18-012 | 840 | 138aa | ENSP00000433362.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PL40 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000533786.1 | TSPAN18-010 | 726 | 146aa | ENSP00000433592.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PKD8 E9PPB7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000520837.1 | TSPAN18-008 | 565 | 76aa | ENSP00000430343.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RFP3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000533202.1 | TSPAN18-011 | 549 | 79aa | ENSP00000434625.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PPB7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000520245.1 | TSPAN18-003 | 981 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000517621.1 | TSPAN18-004 | 827 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000520278.1 | TSPAN18-006 | 817 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000519051.1 | TSPAN18-007 | 709 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000521990.1 | TSPAN18-005 | 700 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
